Class: MotifFinder

MotifFinder

MotifFinders define an algorithm for finding a specific set of Motifs. In the context of MotifFinders, Motifs are sub-graphs of a larger ModelGraph that are of some importance. The found motifs are aggregated in a MotifGroup. Every MotifFinder must implement the MotifFinder#find method, which is solely responsible for performing the actual search for motifs

Constructor

(abstract) new MotifFinder()

The constructor for this abstract class may be invoked by sub-classes
Source:

Methods

(abstract) find(graph) → {MotifGroup}

The find method is solely responsible for performing the actual search for Motifs. This method returns a set of found motifs aggregated in a MotifGroup
Parameters:
Name Type Description
graph ModelGraph The graph on which the search should be performed
Source:
Returns:
The motif group found
Type
MotifGroup